PrIMP

PrIMP predicts modulability of 4 ion channels by accurate prediction models from only peptide sequence.

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You need fasta file

Fasta

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PrIMP (Prediction of ion-channel modulating peptides)

PrIMP predicts the modulability of calcium, sodium, potassium ion channels as well as nicotine acetylcholine receptors (nAChRs) by accurate prediction models from peptide sequences only.

Input file

Input file type is fasta format in which amino acids are represented using single-letter codes.

Limitation of each sequence length is <=300.

Detailed information of fasta links: https://en.wikipedia.org/wiki/FASTA_format

Output file

Output file contains information about probabilities of four respective ion-channel modulability.

Probability with >=0.5 predicts as modulator peptides for respective ion channels.